Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932320.1_cds_XP_016478860.1_70460
CDS Infomation

[gene=LOC107800225] [db_xref=GeneID:107800225] [protein=probable protein phosphatase 2C 27] [protein_id=XP_016478860.1] [location=complement(join(26488..27046,27433..27644,28571..28771,30094..30273))] [gbkey=CDS]
Sequence

ATGTGCATTCAAGACTCAGAACAAGTGAATGAGGCTATGGAGAATTTGGACATTTCAAAG
ACTGATAACAATTTCAAGAACCAATCTTTGCTTTCTAAAGCTGAATTACAACATACCCAG
ATTCAGAATTATGAAAAAATTACAACTTCTAGCCATTCTGTGATGAGAAACTCATTCCCA
CTGGAAAGTATTTCGGAAGACGCAACTATTGTGGATCGGAAACAGATACTCTTTAATAAC
TTCCTCCCAACCCTTAGGTCTGGAGATTGGTCCGATATTGGAGGTCGCATTGACATGGAA
GACACTCACATCTGTATTGCGGACCTAGCTAAGAATTTTGGCCATAATATACTTGGTGAG
GAAGCTATTTCTTTTTATGGAGTCTTTGATGGACATGGTGGGAAGGGAGCATCACAATTT
GTTCGTGACTACTTGCCGAGGATCATTGTTGAAGATGCTGATTTTCCATTGGAACTTGAG
AAAGTGGTCACAAGATCTTTCGTAGAGACAGATGCTGCCTTTGCCAAGTCATGCTCTCTT
GATTCAGCCTTGTCCTCAGGCACTACTGCACTCACCGCAATGATATTTGGAAGATCATTG
CTTGTCGCCAATGCTGGTGATTGTCGAGCAGTTGTATCCCGACGTGGACTGGCTATAGAA
ATGTCAAAGGATCACAGACCTTGTTGTATTAGTGAAAGAACTCGTATAGAGTCCGTGGGT
GGATTTGTTGATGATGGCTACTTGAATGGACAGCTAGGCGTGAGCCGGGCATTAGGTAAC
TGGCACATTAAAGGACTGAAGGAGGTTGAAAAGGGTGGGCCATTGAGCGCTGAGCCTGAA
CTGAAACTGCTGACATTGACAAAGGAAGACGAGTTCCTGATTATTGGTAGTGATGGAATA
TGGGATGTTTTCAGAAGCCAAAATGCAGTGGATTTTGCTCGTAGGAGACTGCAAGAGCAT
AACAATGTGAAGTTTTGCTGCAAGGAAATAGTAGACGAGGCCAAAAAGCGCGGTGCAATA
GACAACTTAACGGTAGTCATTGTTTGTTTTCACTCTGAGCCTCCACCTCCAGTTGTTTTT
CAAAGATCAAGAATAAGGAAAAGTATTTCCGCGGAGGGGCTTGAGAATCTAAGATCTTTG
CTTGAAGGCTAG

Peptide Sequence

PEP ID

XP_016478860.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 27 [Nicotiana tabacum]
Sequence

MCIQDSEQVNEAMENLDISKTDNNFKNQSLLSKAELQHTQIQNYEKITTSSHSVMRNSFP
LESISEDATIVDRKQILFNNFLPTLRSGDWSDIGGRIDMEDTHICIADLAKNFGHNILGE
EAISFYGVFDGHGGKGASQFVRDYLPRIIVEDADFPLELEKVVTRSFVETDAAFAKSCSL
DSALSSGTTALTAMIFGRSLLVANAGDCRAVVSRRGLAIEMSKDHRPCCISERTRIESVG
GFVDDGYLNGQLGVSRALGNWHIKGLKEVEKGGPLSAEPELKLLTLTKEDEFLIIGSDGI
WDVFRSQNAVDFARRRLQEHNNVKFCCKEIVDEAKKRGAIDNLTVVIVCFHSEPPPPVVF
QRSRIRKSISAEGLENLRSLLEG

Transcript Sequence

Gene sequence data has not been registered.